I think this article is definitely worth a read, for those of you in the UK attempting to correspond with the author might be useful, particularly the section
"Alpha‐actinin‐3 R577X polymorphism and the initial phase of exercise‐induced muscle damage", on page 1598.
in short the cause is most likely multifactorial, I still don't buy mitochondrial disease as the most likely etiology, nor do I think everyone in this forum will have the same etiology, some or several combinations of polymorphisms in mitochondrial respiration or skeletal muscle cytoskeletal elements likely combine to create variable susceptibility to this phenomena.
the poster "Shayne G" went the farthest in trying to find an answer, which included a large muscle biopsy, and per post#207, no definitive evidence of a metabolic or glycogen storage disease. he even tried strict keto for 3 months with no change. Katie Compton has the same issue, and she is a world class cycling endurance athlete, I just don't see how someone could reach that level of fitness and endurance performance with a mitochondrial disease.
the one unifying pattern is intolerance to eccentric loading of the cycling muscles after 1-5 days of rest, especially high speed such as running downhill. The best low speed eccentric load I know of is a heavy/slow squat or a lunge with dumbbells. if you are going to be forced off the bike, then experiment with doing squats at the gym with as much weight as you can do for about 10-12 reps 3-5 sets or lunges with dumbbells 10-12 reps 3-5 sets 1-5 days before your time off, and depending on your degree of suspectibility to this you may need to squat or lunge every 1-5 days during your time off the bike.