We know nothing of Freeman's mental state during the furore either. There is no proof that he actually did suffer from any mental health condition or episode.
The point isn't whether or not he actually had a real breakdown, but rather that he completely dodged having to give an explanation, and having to respond to questioning. Everything about his conduct surrounding the incident stinks to high heaven - the hiding, the alleged shocking lack of record-keeping, the stolen laptop,the errant scripts, the writing of a book despite being unable to answer some simple questions in person, etc. These are not the actions or explanations of an innocent doc working solely on the straight and narrow, or a man determined to defend his good name.
Either Freeman was grossly negligent and then embarrassed by this, yet still somehow capable of leading the medical team for multiple Tour winners, or he was doping his riders. I know which explanation makes far more sense to me.